Fitness data for BPHYT_RS27675 in Burkholderia phytofirmans PsJN

amino acid APC transporter
SEED: Arginine/ornithine antiporter ArcD
KEGG: arginine:ornithine antiporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 24hr PHYTO7 MOI 10 -0.8 -2.7 compare
phage 24hr PHYTO6 MOI 10 -0.6 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.9 compare
supernatant control Vogels_fungal_media 0.1X -0.6 -2.9 compare
phage 24hr PHYTO9 MOI 0.1 -0.6 -1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.6 -2.0 compare
phage 36hr PHYTO4 MOI 1 -0.5 -1.4 compare
phage 24hr PHYTO MOI 0.1 -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.6 compare
phage 36hr PHYTO3 MOI 1 -0.5 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -1.3 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.4 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
carbon source Phenylacetic 5 mM (C) +0.5 +2.3 compare
vitamin With vitamins t1 +0.6 +2.2 compare