Fitness data for BPHYT_RS27145 in Burkholderia phytofirmans PsJN

TetR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -2.1 -1.3 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -2.0 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.6 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.6 compare
stress Paraquat dichloride 0.032 mg/ml -1.3 -2.4 compare
carbon source Phenylacetic 5 mM (C) -1.2 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -1.3 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -1.1 -1.1 compare
nophagecontrol 36hr Phyto Lib only +1.1 +1.3 compare
phage 36hr PHYTO4 MOI 0.1 +1.1 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1 +1.0 compare
phage 36hr PHYTO6 MOI 0.1 +1.2 +2.8 compare
phage 36hr PHYTO1 MOI 10 +1.2 +2.8 compare
phage 36hr PHYTO9 MOI 0.1 +1.2 +3.3 compare
phage 36hr PHYTO9 MOI 1 +1.2 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.5 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.5 +2.2 compare
phage 24hr PHYTO6 MOI 10 +1.6 +3.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.0 +3.2 compare