Fitness data for BPHYT_RS26950 in Burkholderia phytofirmans PsJN

MFS transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.9 -2.0 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -3.2 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.7 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -2.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.5 compare
nitrogen source L-Proline (N) +0.6 +2.4 compare
phage 24hr PHYTO7 MOI 1 +0.6 +2.1 compare
motility inner cut, LB soft agar motility assay +0.6 +3.1 compare
phage 24hr PHYTO7 MOI 10 +0.6 +2.0 compare
stress Nickel (II) chloride 0.5 mM +0.6 +4.0 compare
phage 24hr PHYTO11 MOI 1 +0.6 +1.9 compare
carbon source D-Xylose (C) +0.7 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.7 +3.8 compare
temperature LB, 37C +0.7 +2.8 compare
motility inner cut, LB soft agar motility assay +0.9 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +3.0 compare