Fitness data for BPHYT_RS26135 in Burkholderia phytofirmans PsJN

ABC transporter permease
SEED: Putrescine transport system permease protein potI
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
phage P. phyto PHYTO2 MOI 1 -2.5 -0.8 compare
phage 24hr PHYTO7 MOI 10 -2.2 -1.1 compare
phage 36hr PHYTO1 MOI 1 -2.0 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9 -1.1 compare
phage 24hr PHYTO9 MOI 0.1 -1.8 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -1.5 compare
carbon source Phenylacetic 5 mM (C) -1.4 -1.2 compare
carbon source D-Glucose (C) -1.3 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -1.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.3 -1.4 compare
phage P. phyto PHYTO2 MOI 1 -1.3 -0.7 compare
nophagecontrol 36hr Phyto Lib Only -1.3 -0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -1.4 compare
carbon source Dodecandioic (C) -1.2 -1.6 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.3 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +1.3 +2.5 compare
phage 36hr PHYTO2 MOI 1 +1.5 +1.1 compare
phage 36hr PHYTO7 MOI 1 +1.8 +1.4 compare