Fitness data for BPHYT_RS26045 in Burkholderia phytofirmans PsJN

ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.0 -2.5 compare
carbon source Tween 20 (C) -1.1 -2.0 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.8 -1.8 compare
carbon source Suberic (C) -0.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.0 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.7 +1.3 compare
phage 24hr PHYTO1 MOI 10 +0.7 +2.3 compare
phage P. phyto corn MOI 0.1 +0.7 +1.9 compare
phage 36hr PHYTO10 MOI 10 +0.7 +1.9 compare
phage 36hr PHYTO4 MOI 1 +0.7 +2.9 compare
phage 24hr PHYTO9 MOI 10 +0.7 +2.7 compare
phage 24hr PHYTO3 MOI 10 +0.8 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +3.1 compare
phage 24hr PHYTO6 MOI 1 +0.8 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.9 compare
phage 24hr PHYTO11 MOI 0.1 +1.0 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +2.5 compare