Fitness data for BPHYT_RS25885 in Burkholderia phytofirmans PsJN

type III secretion protein
SEED: Flagellar biosynthesis protein FliR
KEGG: type III secretion protein SctT

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
phage 24hr PHYTO MOI 0.1 -3.5 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.8 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -1.3 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.6 -1.2 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -1.0 compare
phage 24hr PHYTO1 MOI 1 -1.2 -1.1 compare
phage 24hr PHYTO3 MOI 1 -1.2 -0.9 compare
phage 36hr PHYTO4 MOI 1 -1.2 -0.8 compare
phage 24hr PHYTO3 MOI 10 -1.1 -0.8 compare
nophagecontrol 36hr Phyto Lib only -1.1 -0.9 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.1 -1.4 compare
phage 36hr PHYTO8 MOI 10 -1.1 -0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.2 compare
phage 36hr PHYTO6 MOI 0.1 -1.0 -0.9 compare
nophagecontrol 24hr Phyto Lib Only -1.0 -0.9 compare
carbon source Malonic (C) -1.0 -1.5 compare
motility outer cut, LB soft agar motility assay +1.2 +2.5 compare
motility outer cut, LB soft agar motility assay +1.2 +2.7 compare
phage 24hr PHYTO7 MOI 1 +1.4 +2.1 compare