Fitness data for BPHYT_RS25825 in Burkholderia phytofirmans PsJN

ABC transporter permease
SEED: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.5 -3.4 compare
phage 24hr PHYTO3 MOI 1 -1.1 -2.4 compare
phage 24hr PHYTO4 MOI 10 -1.1 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -2.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.0 -1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.6 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.7 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.9 compare
phage P. phyto PHYTO2 MOI 0.1 -0.7 -1.3 compare
phage 36hr PHYTO1 MOI 1 -0.7 -1.4 compare
phage 36hr PHYTO3 MOI 1 -0.7 -1.2 compare
phage 24hr PHYTO10 MOI 1 -0.6 -1.5 compare
phage 36hr PHYTO11 MOI 0.1 -0.6 -1.6 compare
phage 36hr PHYTO2 MOI 1 -0.6 -1.2 compare
nitrogen source NAG (N) -0.6 -1.5 compare
phage 24hr PHYTO11 MOI 0.1 +1.0 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.2 +1.8 compare