Fitness data for BPHYT_RS25800 in Burkholderia phytofirmans PsJN

sugar ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -3.1 -1.1 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -2.9 -1.0 compare
carbon source D-Glucose (C) -2.4 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.6 -1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.5 -1.6 compare
nitrogen source L-Phenylalanine (N) -1.5 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.4 -1.0 compare
nitrogen source L-Alanine (N) -1.4 -1.5 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.3 -1.0 compare
nitrogen source L-Isoleucine (N) -1.3 -1.4 compare
phage 36hr PHYTO6 MOI 0.1 +1.3 +0.9 compare
phage 36hr PHYTO9 MOI 1 +1.3 +1.6 compare
carbon source 2-Deoxy-D-Ribose (C) +1.4 +1.7 compare
nophagecontrol 24hr Phyto Lib Only +1.5 +2.6 compare
carbon source Phenylacetic 5 mM (C) +1.5 +0.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +1.6 +3.2 compare
phage 24hr PHYTO6 MOI 10 +1.6 +2.3 compare
carbon source 2-Deoxy-D-Ribose (C) +2.6 +5.0 compare
carbon source 2-Deoxy-D-Ribose (C) +2.8 +5.7 compare