Fitness data for BPHYT_RS25785 in Burkholderia phytofirmans PsJN

sugar ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -2.2 -4.0 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.8 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.4 compare
nitrogen source L-Alanine (N) -0.7 -2.4 compare
vitamin No vitamins t1 -0.7 -1.5 compare
carbon source adipate (C) +0.7 +1.7 compare
phage 24hr PHYTO10 MOI 1 +0.7 +2.2 compare
motility outer cut, LB soft agar motility assay +0.7 +2.4 compare
phage 24hr PHYTO3 MOI 1 +0.7 +2.1 compare
phage 36hr PHYTO8 MOI 10 +0.7 +2.1 compare
carbon source Suberic (C) +0.8 +1.9 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +1.6 compare
carbon source Protocatechuic Acid (C) +1.0 +2.1 compare
phage 24hr PHYTO7 MOI 1 +1.1 +4.0 compare
carbon source 2-Deoxy-D-Ribose (C) +2.6 +5.0 compare
carbon source 2-Deoxy-D-Ribose (C) +2.8 +6.8 compare
carbon source 2-Deoxy-D-Ribose (C) +4.0 +7.3 compare
carbon source 2-Deoxy-D-Ribose (C) +4.3 +8.7 compare