Fitness data for BPHYT_RS25565 in Burkholderia phytofirmans PsJN

hypothetical protein
SEED: EXTRACYTOPLASMIC FUNCTION ALTERNATIVE SIGMA FACTOR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -1.2 compare
phage 36hr PHYTO11 MOI 0.1 -1.1 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -1.4 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.0 -1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.9 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.7 compare
vitamin No vitamins t1 -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.8 +0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.9 +1.6 compare
motility outer cut, LB soft agar motility assay +0.9 +2.0 compare
r2a control R2A control +0.9 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +1.1 +2.4 compare
phage 24hr PHYTO MOI 0.1 +1.1 +2.0 compare
carbon source Malonic (C) +1.4 +1.9 compare
phage 36hr PHYTO3 MOI 1 +1.5 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 +0.9 compare