Fitness data for BPHYT_RS25265 in Burkholderia phytofirmans PsJN

pyridoxamine 5'-phosphate oxidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 -3.1 compare
carbon source Phenylacetic 5 mM (C) -0.9 -1.5 compare
phage 24hr PHYTO6 MOI 0.1 -0.8 -2.1 compare
nitrogen source Carnitine Hydrochloride (N) -0.7 -3.4 compare
temperature LB, 37C -0.7 -2.2 compare
phage 24hr PHYTO11 MOI 1 -0.7 -1.6 compare
motility outer cut, LB soft agar motility assay -0.7 -2.6 compare
nophagecontrol 36hr Phyto Lib only -0.6 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.5 compare
phage 36hr PHYTO11 MOI 1 +0.5 +1.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +1.4 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +1.6 compare
carbon source Azelaic (C) +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.5 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.6 +1.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.7 +1.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.7 +1.7 compare
phage 36hr PHYTO11 MOI 1 +0.8 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.8 +1.8 compare