Fitness data for BPHYT_RS25105 in Burkholderia phytofirmans PsJN

sarcosine oxidase subunit beta
SEED: Sarcosine oxidase beta subunit (EC 1.5.3.1)
KEGG: sarcosine oxidase, subunit beta

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Carnitine Hydrochloride (N) -2.4 -5.2 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.8 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.8 -1.2 compare
nitrogen source L-Lysine (N) -0.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.2 compare
phage 24hr PHYTO MOI 0.1 -0.6 -1.8 compare
phage 24hr PHYTO4 MOI 0.1 -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -2.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.6 -1.7 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -2.9 compare
nitrogen source L-Isoleucine (N) -0.6 -1.8 compare
phage 24hr PHYTO6 MOI 0.1 -0.6 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.6 -3.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -1.9 compare
carbon source Dodecandioic (C) +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare
carbon source Protocatechuic Acid (C) +0.6 +2.1 compare
carbon source Sebacic (C) +0.7 +2.0 compare
carbon source D-Glucose (C) +0.7 +2.2 compare