Fitness data for BPHYT_RS24700 in Burkholderia phytofirmans PsJN

3-methyladenine DNA glycosylase
SEED: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)
KEGG: DNA-3-methyladenine glycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage 24hr PHYTO2 MOI 0.1 -0.5 -2.1 compare
carbon source L-Arabinose (C) -0.4 -2.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.4 -2.0 compare
carbon source Suberic (C) -0.4 -2.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.3 -1.3 compare
phage 36hr PHYTO4 MOI 1 +0.3 +1.6 compare
phage P. phyto PHYTO2 MOI 0.1 +0.3 +1.4 compare
nitrogen source L-Citrulline (N) +0.3 +1.9 compare
carbon source D-Glucose (C) +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.4 compare
r2a control R2A control +0.4 +2.3 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.4 +1.5 compare
nitrogen source Carnitine Hydrochloride (N) +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.5 compare
carbon source Protocatechuic Acid (C) +0.4 +1.7 compare
phage P. phyto PHYTO2 MOI 1 +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.5 compare