Fitness data for BPHYT_RS24675 in Burkholderia phytofirmans PsJN

spermidine/putrescine ABC transporter substrate-binding protein
SEED: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage 24hr PHYTO MOI 0.1 -0.9 -2.4 compare
motility outer cut, LB soft agar motility assay -0.7 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.9 compare
nophagecontrol 36hr Phyto Lib only -0.6 -2.1 compare
motility inner cut, LB soft agar motility assay -0.6 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -2.4 compare
phage P. phyto PHYTO2 MOI 1 -0.6 -1.6 compare
nophagecontrol 24hr Phyto Lib Only -0.6 -2.2 compare
phage 36hr PHYTO11 MOI 0.1 -0.5 -1.8 compare
phage 36hr PHYTO2 MOI 1 -0.5 -1.6 compare
phage 36hr PHYTO2 MOI 1 -0.5 -1.8 compare
temperature LB 37C -0.5 -2.2 compare
carbon source D-Glucose (C) -0.5 -1.8 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.5 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.0 compare
carbon source Protocatechuic Acid (C) -0.5 -2.2 compare
phage 24hr PHYTO8 MOI 1 -0.5 -1.3 compare
nitrogen source Ammonium chloride (N) +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.4 compare