Fitness data for BPHYT_RS24435 in Burkholderia phytofirmans PsJN

cell envelope biogenesis protein OmpA
SEED: Outer membrane protein assembly factor YaeT precursor
KEGG: chemotaxis protein MotB; OmpA-OmpF porin, OOP family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
phage 24hr PHYTO10 MOI 10 -0.6 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
phage 24hr PHYTO MOI 0.1 -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.2 compare
phage 24hr PHYTO6 MOI 10 -0.4 -1.7 compare
phage 36hr PHYTO10 MOI 10 -0.4 -1.8 compare
phage 36hr PHYTO1 MOI 10 -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.2 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +1.2 compare
carbon source Malonic (C) +0.4 +1.5 compare
carbon source Protocatechuic Acid (C) +0.4 +2.3 compare
nitrogen source Carnitine Hydrochloride (N) +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.5 compare