Fitness data for BPHYT_RS24400 in Burkholderia phytofirmans PsJN

EvpB family type VI secretion protein
SEED: Uncharacterized protein ImpC
KEGG: type VI secretion system protein ImpC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage 36hr PHYTO11 MOI 0.1 -0.5 -1.7 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.5 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.3 -1.6 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.3 -1.5 compare
phage 36hr PHYTO8 MOI 0.1 -0.3 -1.2 compare
carbon source D-Xylose (C) -0.3 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3 -1.9 compare
carbon source Phenylacetic 5 mM (C) +0.3 +1.6 compare
carbon source Malonic (C) +0.3 +1.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.8 compare
phage 24hr PHYTO4 MOI 10 +0.3 +1.3 compare
phage 36hr PHYTO1 MOI 10 +0.4 +1.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +0.9 compare
phage 36hr PHYTO4 MOI 1 +0.4 +1.7 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.6 compare
phage 36hr PHYTO1 MOI 1 +0.4 +2.4 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.5 +2.0 compare