Fitness data for BPHYT_RS24025 in Burkholderia phytofirmans PsJN

histidine utilization repressor
SEED: Histidine utilization repressor
KEGG: GntR family transcriptional regulator, histidine utilization repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.1 -3.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.9 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.7 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.3 compare
phage 24hr PHYTO3 MOI 10 -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.6 compare
carbon source 2-Deoxy-D-Ribose (C) -0.6 -2.4 compare
carbon source Tween 20 (C) -0.6 -1.8 compare
phage 24hr PHYTO10 MOI 10 -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.9 compare
phage 36hr PHYTO2 MOI 1 -0.5 -1.9 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -1.6 compare
phage 24hr PHYTO3 MOI 10 +0.5 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +1.6 compare
no phage control No phage control +0.6 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.4 compare