Fitness data for BPHYT_RS23960 in Burkholderia phytofirmans PsJN

sugar ABC transporter
SEED: Ferric iron ABC transporter, ATP-binding protein
KEGG: sulfonate/nitrate/taurine transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -1.7 compare
carbon source Phenylacetic 5 mM (C) -0.7 -2.3 compare
carbon source D-Glucose 20 mM (C) -0.6 -2.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.6 compare
phage 24hr PHYTO6 MOI 1 +0.7 +1.9 compare
carbon source adipate (C) +0.7 +2.7 compare
carbon source Suberic (C) +0.8 +3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.5 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.8 +2.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.8 +1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.8 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.6 +1.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.6 +1.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.7 +1.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.9 +2.1 compare