Fitness data for BPHYT_RS23340 in Burkholderia phytofirmans PsJN

sugar transporter
SEED: Tyrosine-protein kinase Wzc (EC 2.7.10.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.9 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.4 compare
motility outer cut, LB soft agar motility assay -0.7 -2.7 compare
phage 36hr PHYTO1 MOI 10 -0.6 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.0 compare
carbon source Suberic (C) -0.5 -2.0 compare
nophagecontrol 36hr Phyto Lib Only -0.5 -1.7 compare
nitrogen source L-Glutamic (N) -0.5 -1.6 compare
carbon source D-Glucose (C) -0.5 -2.7 compare
motility outer cut, LB soft agar motility assay -0.5 -2.6 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -1.3 compare
phage 36hr PHYTO11 MOI 1 +0.5 +1.7 compare
phage 36hr PHYTO3 MOI 1 +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.0 compare
carbon source 2-Deoxy-D-Ribose (C) +0.5 +2.7 compare
carbon source 2-Deoxy-D-Ribose (C) +0.5 +2.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.6 +1.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.7 +2.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.7 +2.7 compare