Fitness data for BPHYT_RS23160 in Burkholderia phytofirmans PsJN

Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data)
Original annotation: glutamine synthetase
SEED: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
KEGG: glutamine synthetase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Putrescine (C) -4.0 -5.2 compare
nitrogen source Putrescine (N) -3.7 -5.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -3.1 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -2.3 compare
nitrogen source L-Isoleucine (N) -1.2 -2.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.1 -1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.8 -1.7 compare
stress Paraquat dichloride 0.064 mg/ml -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -1.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.8 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.7 compare
phage 24hr PHYTO1 MOI 10 +0.7 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +1.6 compare
nophagecontrol 24hr Phyto Lib Only +0.7 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +1.9 compare
phage 24hr PHYTO7 MOI 10 +0.8 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +5.0 compare