Fitness data for BPHYT_RS22915 in Burkholderia phytofirmans PsJN

pilus assembly protein CpaE
SEED: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
KEGG: pilus assembly protein CpaE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nophagecontrol 24hr Phyto Lib Only -1.6 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -2.0 compare
phage 24hr PHYTO2 MOI 0.1 -1.2 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.2 -2.1 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.1 -1.6 compare
phage 24hr PHYTO9 MOI 10 -1.1 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -1.4 compare
phage 24hr PHYTO2 MOI 1 -1.0 -1.3 compare
phage 24hr PHYTO MOI 0.1 -1.0 -1.0 compare
nitrogen source L-Glutamic (N) -1.0 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.9 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -1.7 compare
phage 24hr PHYTO3 MOI 10 -0.9 -1.1 compare
phage 36hr PHYTO4 MOI 1 -0.9 -0.6 compare
phage 24hr PHYTO6 MOI 0.1 -0.9 -1.3 compare
phage 24hr PHYTO3 MOI 0.1 -0.9 -0.9 compare