Fitness data for BPHYT_RS22710 in Burkholderia phytofirmans PsJN

XRE family transcriptional regulator
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage 24hr PHYTO10 MOI 10 -1.3 -2.3 compare
phage 24hr PHYTO2 MOI 0.1 -1.3 -3.1 compare
phage 36hr PHYTO2 MOI 1 -1.1 -1.6 compare
phage 24hr PHYTO10 MOI 10 -1.1 -2.0 compare
carbon source Sebacic (C) -0.9 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.5 compare
phage 24hr PHYTO6 MOI 0.1 -0.9 -1.4 compare
carbon source adipate (C) -0.8 -2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 -1.2 compare
carbon source Suberic (C) -0.8 -1.1 compare
carbon source Phenylacetic 5 mM (C) +0.8 +1.5 compare
nitrogen source Uridine (N) +0.9 +4.3 compare
carbon source Malonic (C) +0.9 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.0 compare
vitamin With vitamins t2 +0.9 +1.9 compare
carbon source Phenylacetic 5 mM (C) +1.0 +2.9 compare
vitamin No vitamins t2 +1.0 +1.5 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.2 +2.4 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.4 +1.6 compare