Fitness data for BPHYT_RS22340 in Burkholderia phytofirmans PsJN

methionine sulfoxide reductase A
SEED: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
KEGG: peptide-methionine (S)-S-oxide reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -1.9 compare
carbon source Phenylacetic 5 mM (C) -0.8 -1.5 compare
motility inner cut, LB soft agar motility assay -0.8 -1.4 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.8 -1.2 compare
carbon source Sebacic (C) -0.8 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.7 +1.4 compare
vitamin With vitamins t2 +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +2.1 compare
vitamin No vitamins t1 +0.8 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.5 compare
phage 36hr PHYTO11 MOI 0.1 +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.3 compare
phage 24hr PHYTO9 MOI 10 +0.9 +1.5 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.0 +3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +4.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.5 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.1 +1.1 compare