Fitness data for BPHYT_RS22295 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Cys regulon transcriptional activator CysB
KEGG: LysR family transcriptional regulator, transcriptional activator of nhaA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.8 -1.3 compare
phage P. phyto PHYTO2 MOI 1 -2.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.3 -1.0 compare
phage 36hr PHYTO11 MOI 1 -1.9 -1.4 compare
carbon source D-Glucose (C) -1.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.7 -1.0 compare
motility outer cut, LB soft agar motility assay -1.7 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.5 -1.0 compare
nutrient L-Serine -1.3 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.2 -0.7 compare
carbon source Phenylacetic 5 mM (C) +1.2 +1.3 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.2 +1.5 compare
nitrogen source NAG (N) +1.2 +1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.3 +1.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.3 +1.4 compare
phage 24hr PHYTO11 MOI 1 +1.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +1.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.2 +2.5 compare