Fitness data for BPHYT_RS22065 in Burkholderia phytofirmans PsJN

DNA-binding protein
SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
KEGG: GntR family transcriptional regulator / MocR family aminotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage 24hr PHYTO3 MOI 10 -0.9 -2.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.8 -2.9 compare
carbon source Sebacic (C) -0.7 -2.3 compare
nitrogen source D-Alanine (N) -0.6 -3.5 compare
phage 36hr PHYTO7 MOI 1 -0.6 -2.5 compare
carbon source adipate (C) -0.6 -1.9 compare
phage 24hr PHYTO10 MOI 10 -0.6 -2.6 compare
carbon source D-Glucose (C) -0.6 -2.4 compare
phage 36hr PHYTO8 MOI 10 -0.5 -1.6 compare
stress Bacitracin 0.25 mg/ml -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.2 compare
carbon source Phenylacetic 5 mM (C) +0.5 +1.6 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.3 compare
motility outer cut, LB soft agar motility assay +0.8 +2.5 compare