Fitness data for BPHYT_RS22055 in Burkholderia phytofirmans PsJN

DNA-binding protein
SEED: Transcriptional regulator, XRE family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Phenylacetic 5 mM (C) -1.9 -1.7 compare
carbon source D-Galacturonic Acid (C) -1.3 -1.7 compare
carbon source succinate (C) -1.1 -1.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.8 -1.0 compare
nitrogen source L-Phenylalanine (N) -0.8 -1.1 compare
phage 24hr PHYTO3 MOI 1 +0.8 +2.0 compare
phage 24hr PHYTO6 MOI 10 +0.8 +1.7 compare
phage 36hr PHYTO10 MOI 10 +0.8 +2.0 compare
phage 24hr PHYTO6 MOI 0.1 +0.9 +2.3 compare
phage 36hr PHYTO3 MOI 1 +0.9 +2.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.9 +1.6 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.9 +1.9 compare
phage 36hr PHYTO3 MOI 1 +1.1 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.7 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.7 +4.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.8 +5.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +3.8 +11.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +7.8 +16.4 compare