Fitness data for BPHYT_RS22005 in Burkholderia phytofirmans PsJN

ABC transporter permease
SEED: ABC-type spermidine/putrescine transport system, permease component II
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.5 compare
phage 36hr PHYTO8 MOI 10 -0.6 -2.3 compare
phage 24hr PHYTO7 MOI 10 -0.6 -2.1 compare
temperature LB, 37C -0.6 -1.9 compare
carbon source 2-Deoxy-D-Ribose (C) -0.5 -1.4 compare
phage 36hr PHYTO6 MOI 1 -0.5 -1.3 compare
pH LB, pH5 -0.5 -2.8 compare
r2a control R2A control -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.4 compare
phage P. phyto PHYTO2 MOI 1 -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.4 compare
carbon source D-Glucose (C) -0.5 -1.7 compare
carbon source L-Malic (C) +0.5 +2.5 compare
carbon source L-Fucose (C) +0.5 +1.9 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +1.3 compare
carbon source D-Fructose (C) +0.5 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.3 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.9 +2.5 compare