Fitness data for BPHYT_RS21935 in Burkholderia phytofirmans PsJN

MarR family transcriptional regulator
SEED: Transcriptional regulator, MarR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -2.9 compare
phage 36hr PHYTO6 MOI 10 -0.9 -2.0 compare
phage 24hr PHYTO8 MOI 1 -0.9 -2.1 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.8 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.8 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.5 compare
carbon source 2-Deoxy-D-Ribose (C) -0.7 -2.1 compare
carbon source D-Glucose (C) -0.7 -1.2 compare
carbon source L-Arginine (C) -0.7 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.8 +1.5 compare
motility outer cut, LB soft agar motility assay +0.8 +1.8 compare
phage 24hr PHYTO4 MOI 10 +0.8 +2.9 compare
supernatant control Vogels_fungal_media 0.1X +0.9 +1.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.9 +2.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +1.3 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.3 +1.6 compare