Fitness data for BPHYT_RS21725 in Burkholderia phytofirmans PsJN

taurine ABC transporter substrate-binding protein
SEED: Taurine-binding periplasmic protein TauA
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
nophagecontrol 24hr Phyto Lib only -2.5 -1.7 compare
phage 24hr PHYTO7 MOI 10 -2.1 -1.5 compare
carbon source succinate (C) -2.0 -2.1 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -1.9 -1.1 compare
phage P. phyto PHYTO2 MOI 1 -1.9 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -1.9 -0.9 compare
carbon source Azelaic (C) -1.8 -1.6 compare
phage 24hr PHYTO9 MOI 10 -1.5 -1.2 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.5 -1.0 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.4 -1.2 compare
phage 36hr PHYTO6 MOI 10 -1.3 -1.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.3 -1.4 compare
motility outer cut, LB soft agar motility assay +1.3 +1.6 compare
nitrogen source L-Glutamic (N) +1.3 +1.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +1.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.5 +1.4 compare
phage 24hr PHYTO6 MOI 10 +1.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.6 +1.4 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.8 +2.4 compare