Fitness data for BPHYT_RS21695 in Burkholderia phytofirmans PsJN

membrane protein
SEED: INTEGRAL MEMBRANE PROTEIN (Rhomboid family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.2 compare
phage 36hr PHYTO7 MOI 1 -0.8 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.0 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -1.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.7 -1.6 compare
nophagecontrol 24hr Phyto Lib Only -0.6 -1.6 compare
phage 36hr PHYTO10 MOI 10 -0.6 -1.5 compare
phage 36hr PHYTO3 MOI 1 -0.6 -1.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -1.7 compare
motility inner cut, LB soft agar motility assay +0.6 +2.4 compare
motility outer cut, LB soft agar motility assay +0.6 +2.1 compare
phage 36hr PHYTO1 MOI 1 +0.6 +1.7 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.2 compare
phage 36hr PHYTO9 MOI 0.1 +0.8 +2.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.9 +1.6 compare
carbon source Malonic (C) +1.0 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +0.9 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +1.0 +2.1 compare