Fitness data for BPHYT_RS21565 in Burkholderia phytofirmans PsJN

lysine transporter LysE
SEED: Transporter, LysE family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 24hr PHYTO3 MOI 10 -1.2 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.8 compare
phage 24hr PHYTO MOI 0.1 -0.9 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.0 compare
carbon source Suberic (C) -0.8 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.0 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.5 compare
vitamin No vitamins t1 -0.7 -2.1 compare
phage 36hr PHYTO10 MOI 1 -0.7 -1.6 compare
carbon source Suberic (C) -0.7 -1.3 compare
carbon source Disodium Glutarate (C) -0.7 -2.7 compare
carbon source Tween 20 (C) -0.7 -1.2 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.7 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.8 compare
carbon source L-Fucose (C) +0.7 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.8 +3.2 compare