Fitness data for BPHYT_RS21530 in Burkholderia phytofirmans PsJN

RNA polymerase subunit sigma-24
SEED: DNA-directed RNA polymerase specialized sigma subunit, sigma24-like

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
phage 24hr PHYTO4 MOI 0.1 -2.7 -1.7 compare
phage 36hr PHYTO6 MOI 0.1 -2.5 -1.4 compare
phage 36hr PHYTO8 MOI 10 -1.9 -1.4 compare
phage 36hr PHYTO8 MOI 10 -1.8 -1.4 compare
carbon source Protocatechuic Acid (C) -1.8 -2.1 compare
phage 24hr PHYTO9 MOI 0.1 -1.7 -1.5 compare
phage 24hr PHYTO3 MOI 10 -1.7 -1.1 compare
phage 36hr PHYTO11 MOI 0.1 -1.7 -1.3 compare
phage 36hr PHYTO2 MOI 1 -1.6 -1.3 compare
phage 24hr PHYTO2 MOI 0.1 -1.6 -1.3 compare
tn7 efficiency Outgrowth after Tn7 transformation -1.6 -2.7 compare
phage 36hr PHYTO1 MOI 1 -1.5 -1.5 compare
phage 36hr PHYTO1 MOI 10 -1.5 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -1.3 compare
phage 24hr PHYTO8 MOI 1 -1.3 -1.3 compare
phage 24hr PHYTO7 MOI 1 -1.3 -1.2 compare
phage 24hr PHYTO11 MOI 1 -1.2 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +0.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +1.4 +1.3 compare