Fitness data for BPHYT_RS21265 in Burkholderia phytofirmans PsJN

ABC transporter permease
SEED: ABC transporter, permease protein
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.2 compare
phage 36hr PHYTO10 MOI 10 -0.5 -1.8 compare
phage 24hr PHYTO3 MOI 10 -0.4 -2.0 compare
carbon source Azelaic (C) -0.4 -1.6 compare
nitrogen source L-Glutamine (N) -0.4 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.4 compare
phage P. phyto PHYTO2 MOI 1 -0.4 -1.4 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.4 -1.3 compare
carbon source 2-Deoxy-D-Ribose (C) -0.4 -1.8 compare
nitrogen source L-Lysine (N) +0.4 +1.6 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.6 compare
carbon source D-Glucose 20 mM (C) +0.4 +1.9 compare
phage 36hr PHYTO10 MOI 10 +0.4 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.3 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.4 +2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.9 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.1 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +3.0 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.6 +3.0 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.7 compare