Fitness data for BPHYT_RS21225 in Burkholderia phytofirmans PsJN

GntR family transcriptional regulator
SEED: transcriptional regulator, GntR family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Suberic (C) -0.8 -2.1 compare
phage 24hr PHYTO4 MOI 10 -0.7 -2.2 compare
phage 36hr PHYTO1 MOI 10 -0.6 -2.3 compare
phage 36hr PHYTO6 MOI 1 -0.5 -1.8 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -2.0 compare
phage 24hr PHYTO4 MOI 0.1 -0.5 -1.8 compare
phage 24hr PHYTO2 MOI 1 -0.5 -1.7 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.5 compare
phage 36hr PHYTO8 MOI 10 +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
stress A22 0.005 mg/ml +0.5 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.2 compare
motility inner cut, LB soft agar motility assay +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.1 compare
nitrogen source L-Isoleucine (N) +0.6 +1.6 compare
nitrogen source L-Lysine (N) +0.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.5 compare