Fitness data for BPHYT_RS20865 in Burkholderia phytofirmans PsJN

2-hydroxyacid dehydrogenase
SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
nophagecontrol 24hr Phyto Lib only -3.1 -2.1 compare
temperature LB, 37C -2.1 -2.1 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -1.4 -2.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.4 -1.6 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.3 -2.3 compare
phage 24hr PHYTO9 MOI 10 -1.3 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.4 compare
phage 36hr PHYTO8 MOI 0.1 -1.1 -1.0 compare
phage P. phyto PHYTO2 MOI 1 -1.1 -1.1 compare
carbon source Tween 20 (C) -1.0 -0.9 compare
phage 24hr PHYTO3 MOI 10 -1.0 -0.9 compare
phage 36hr PHYTO6 MOI 1 -1.0 -1.0 compare
phage 36hr PHYTO1 MOI 1 -1.0 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.0 -1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.0 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.2 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.9 +4.0 compare