Fitness data for BPHYT_RS20690 in Burkholderia phytofirmans PsJN

ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source D-Ribose (C) -1.4 -1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.3 -1.2 compare
phage 24hr PHYTO7 MOI 10 -1.3 -1.7 compare
phage 24hr PHYTO3 MOI 10 -1.2 -1.6 compare
nitrogen source L-Lysine (N) -1.2 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -1.3 compare
phage 36hr PHYTO10 MOI 10 -1.0 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.1 compare
nophagecontrol 36hr Phyto Lib only -1.0 -1.2 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.9 -1.8 compare
phage 24hr PHYTO6 MOI 1 +0.9 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +0.9 +1.7 compare
carbon source adipate (C) +1.0 +1.8 compare
stress Paraquat dichloride 0.032 mg/ml +1.0 +2.4 compare
phage 36hr PHYTO2 MOI 1 +1.0 +1.9 compare
stress Chloride 200 mM +1.1 +2.6 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +1.1 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +0.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.6 +3.3 compare