Fitness data for BPHYT_RS20645 in Burkholderia phytofirmans PsJN

RND transporter
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage 24hr PHYTO11 MOI 0.1 -1.5 -3.3 compare
phage P. phyto PHYTO2 MOI 1 -1.1 -2.0 compare
carbon source 2-Deoxy-D-Ribose (C) -0.7 -2.8 compare
phage 24hr PHYTO3 MOI 10 -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.8 compare
motility outer cut, LB soft agar motility assay -0.7 -1.6 compare
phage 24hr PHYTO2 MOI 0.1 -0.6 -1.4 compare
phage 36hr PHYTO10 MOI 10 -0.6 -1.3 compare
phage 36hr PHYTO3 MOI 1 -0.6 -2.1 compare
phage 24hr PHYTO6 MOI 10 -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -0.7 compare
phage 36hr PHYTO10 MOI 1 -0.5 -1.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.0 compare
phage 24hr PHYTO7 MOI 1 +0.6 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.7 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +1.3 +2.4 compare