Fitness data for BPHYT_RS20520 in Burkholderia phytofirmans PsJN

transcriptional regulator
SEED: transcriptional regulator
KEGG: LysR family transcriptional regulator, hca operon transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -5.0 -1.1 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.8 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -1.0 compare
phage 36hr PHYTO3 MOI 1 -1.6 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -1.0 compare
carbon source D-Glucose (C) -1.2 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -1.1 compare
phage 36hr PHYTO11 MOI 1 -1.1 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -0.9 compare
phage 36hr PHYTO2 MOI 1 +1.1 +1.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.2 +1.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.2 +1.6 compare
carbon source D-Glucose (C) +1.2 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +1.3 +1.2 compare
carbon source Sebacic (C) +1.3 +1.5 compare
carbon source Protocatechuic Acid (C) +1.3 +1.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.4 +1.7 compare
phage 24hr PHYTO3 MOI 10 +1.6 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.9 +2.7 compare