Fitness data for BPHYT_RS20430 in Burkholderia phytofirmans PsJN

3-dehydroquinate dehydratase
SEED: 3-dehydroquinate dehydratase II (EC 4.2.1.10)
KEGG: 3-dehydroquinate dehydratase II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.3 -1.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.2 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.1 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 -1.3 compare
phage PHYTO3 MOI 0.1 -1.0 -1.2 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -1.0 -1.9 compare
nitrogen source L-Lysine (N) -0.9 -1.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.9 -1.2 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.8 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.6 compare
phage P. phyto corn MOI 1 +0.8 +1.5 compare
motility outer cut, LB soft agar motility assay +0.8 +1.6 compare
carbon source Trisodium citrate (C) +0.8 +1.9 compare
phage 36hr PHYTO4 MOI 1 +0.8 +2.3 compare
stress Dimethyl Sulfoxide 6 vol% +0.9 +2.8 compare
motility outer cut, LB soft agar motility assay +1.0 +1.5 compare
phage 24hr PHYTO6 MOI 10 +1.0 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.1 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.5 +2.7 compare