Fitness data for BPHYT_RS20330 in Burkholderia phytofirmans PsJN

IclR family transcriptional regulator
SEED: Transcriptional regulator, IclR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.1X -0.8 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.7 -1.2 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.7 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.5 compare
phage 36hr PHYTO4 MOI 0.1 -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.4 compare
carbon source D-Gluconic Acid (C) -0.5 -2.1 compare
phage 24hr PHYTO8 MOI 1 -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.0 compare
carbon source L-Fucose (C) +0.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.6 compare
stress Nickel (II) chloride 0.5 mM +0.5 +2.7 compare
carbon source Dodecandioic (C) +0.5 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare
carbon source Tween 20 (C) +0.7 +2.9 compare