Fitness data for BPHYT_RS20180 in Burkholderia phytofirmans PsJN

sugar ABC transporter substrate-binding protein
SEED: Polysaccharide export lipoprotein Wza
KEGG: polysaccharide export outer membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.8 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -2.7 compare
nophagecontrol 36hr Phyto Lib only -1.2 -2.2 compare
carbon source Protocatechuic Acid (C) -1.2 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.1 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.2 compare
carbon source Phenylacetic 5 mM (C) -1.0 -1.9 compare
carbon source D-Glucose (C) -1.0 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.3 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.9 -2.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.8 -2.1 compare
carbon source Protocatechuic Acid (C) +0.8 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.9 +1.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.0 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +1.2 +2.4 compare