Fitness data for BPHYT_RS19650 in Burkholderia phytofirmans PsJN

general secretion pathway protein N
SEED: General secretion pathway protein N
KEGG: general secretion pathway protein N

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.2 -2.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -1.1 -2.3 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.9 -2.7 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.6 compare
carbon source 2-Deoxy-D-Ribose (C) -0.7 -3.3 compare
carbon source Protocatechuic Acid (C) -0.6 -1.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.5 compare
carbon source D-Glucose (C) -0.6 -3.2 compare
phage 36hr PHYTO8 MOI 10 -0.6 -1.9 compare
phage 24hr PHYTO4 MOI 10 -0.6 -1.5 compare
phage 36hr PHYTO2 MOI 1 -0.6 -2.2 compare
phage 36hr PHYTO1 MOI 1 -0.6 -1.8 compare
carbon source 2-Deoxy-D-Ribose (C) -0.6 -1.9 compare
phage P. phyto corn MOI 1 -0.6 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.6 +2.2 compare
nitrogen source Carnitine Hydrochloride (N) +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.8 compare