Fitness data for BPHYT_RS19065 in Burkholderia phytofirmans PsJN

DNA-3-methyladenine glycosidase
SEED: DNA-3-methyladenine glycosylase (EC 3.2.2.20)
KEGG: DNA-3-methyladenine glycosylase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 36hr PHYTO6 MOI 1 -0.6 -3.3 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.5 -2.4 compare
phage 24hr PHYTO10 MOI 10 -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.6 compare
phage 36hr PHYTO11 MOI 1 -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.2 compare
phage 36hr PHYTO1 MOI 10 -0.4 -1.6 compare
phage 36hr PHYTO10 MOI 10 -0.4 -1.8 compare
carbon source Suberic (C) -0.4 -1.8 compare
phage 36hr PHYTO MOI 0.1 -0.4 -1.8 compare
phage 24hr PHYTO9 MOI 0.1 -0.4 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -1.7 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.4 -1.3 compare
phage 36hr PHYTO6 MOI 10 -0.4 -1.5 compare
phage 24hr PHYTO1 MOI 10 -0.4 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.9 compare
motility inner cut, LB soft agar motility assay +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare