Fitness data for BPHYT_RS19045 in Burkholderia phytofirmans PsJN

hypothetical protein
SEED: contains type I hydrophobic transmembrane region and ATP/GTP binding motif

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.4 -2.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.3 -1.7 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.3 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.6 compare
carbon source D-Xylose (C) -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.5 compare
stress Bacitracin 0.25 mg/ml +0.2 +1.8 compare
nitrogen source Ammonium chloride (N) +0.2 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.4 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.7 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.5 compare
phage 36hr PHYTO11 MOI 1 +0.3 +2.3 compare
phage 36hr PHYTO8 MOI 10 +0.3 +2.2 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.4 +1.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.3 compare
motility outer cut, LB soft agar motility assay +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.4 +2.9 compare