Fitness data for BPHYT_RS18965 in Burkholderia phytofirmans PsJN

chemotaxis protein CheY
SEED: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
KEGG: two-component system, chemotaxis family, response regulator CheY

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -4.4 -1.3 compare
motility outer cut, LB soft agar motility assay -4.1 -1.4 compare
nitrogen source L-Lysine (N) -3.9 -1.2 compare
supernatant control Vogels_fungal_media; pH 5.5 -2.9 -1.7 compare
motility outer cut, LB soft agar motility assay -2.5 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -2.3 -1.3 compare
carbon source D-Sorbitol (C) -2.1 -1.9 compare
motility inner cut, LB soft agar motility assay -2.1 -1.8 compare
motility inner cut, LB soft agar motility assay -1.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.8 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -1.7 compare
nitrogen source Carnitine Hydrochloride (N) -1.8 -1.7 compare
phage 24hr PHYTO3 MOI 0.1 -1.7 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.6 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -1.8 compare
motility outer cut, LB soft agar motility assay -1.5 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.5 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 +1.4 compare