Fitness data for BPHYT_RS18570 in Burkholderia phytofirmans PsJN

tRNA 2-thiocytidine biosynthesis protein TtcA
SEED: tRNA(Cytosine32)-2-thiocytidine synthetase
KEGG: tRNA 2-thiocytidine biosynthesis protein TtcA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage 36hr PHYTO3 MOI 1 -0.4 -1.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
phage 24hr PHYTO4 MOI 10 -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.2 compare
phage 24hr PHYTO1 MOI 1 -0.3 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.3 compare
phage 24hr PHYTO2 MOI 1 -0.3 -2.0 compare
phage 36hr PHYTO1 MOI 1 -0.3 -2.3 compare
phage 24hr PHYTO1 MOI 10 -0.3 -1.7 compare
phage 24hr PHYTO7 MOI 1 -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +2.0 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.3 compare