Fitness data for BPHYT_RS18490 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.9 compare
phage 24hr PHYTO3 MOI 10 -0.4 -1.8 compare
phage 36hr PHYTO7 MOI 1 +0.4 +1.8 compare
carbon source D-Glucose (C) +0.4 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +1.6 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.4 +1.3 compare
carbon source Dodecandioic (C) +0.4 +2.7 compare
phage 36hr PHYTO8 MOI 0.1 +0.5 +2.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.5 +3.1 compare
phage 24hr PHYTO11 MOI 0.1 +0.5 +2.7 compare
carbon source adipate (C) +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.6 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.9 compare
motility outer cut, LB soft agar motility assay +0.6 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.4 compare