Fitness data for BPHYT_RS18290 in Burkholderia phytofirmans PsJN

AsnC family transcriptional regulator
SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
KEGG: Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.0 -3.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.0 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.7 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 -1.4 compare
phage P. phyto corn MOI 1 +0.5 +2.6 compare
temperature LB, 23C +0.5 +1.7 compare
phage 24hr PHYTO8 MOI 1 +0.5 +1.6 compare
nophagecontrol 24hr Phyto Lib only +0.5 +2.4 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.6 +2.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.9 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.6 +1.4 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.6 +3.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.6 +3.3 compare
phage 24hr PHYTO6 MOI 10 +0.7 +2.0 compare