Fitness data for BPHYT_RS17920 in Burkholderia phytofirmans PsJN

protein CyaY
SEED: Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly
KEGG: CyaY protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.8)


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group condition fitness t score  
phage P. phyto corn MOI 1 -4.8 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -4.6 -1.1 compare
phage 36hr PHYTO8 MOI 10 -4.6 -1.4 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -4.5 -1.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -4.4 -1.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -4.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -4.0 -1.8 compare
carbon source Protocatechuic Acid (C) -3.6 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -3.5 -0.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -3.3 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.3 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.1 -1.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -3.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.9 -1.0 compare
nitrogen source L-Asparagine (N) -2.9 -1.7 compare
pH LB, pH4 -2.9 -2.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -2.8 -1.2 compare
pH LB, pH4 -2.8 -2.3 compare
phage P. phyto corn MOI 0.1 -2.8 -1.5 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.8 -1.6 compare