Fitness data for BPHYT_RS17580 in Burkholderia phytofirmans PsJN

SAM-dependent methyltransferase
SEED: SAM-dependent methyltransferases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.4 -6.0 compare
motility inner cut, LB soft agar motility assay -0.9 -4.0 compare
motility outer cut, LB soft agar motility assay -0.8 -3.1 compare
motility inner cut, LB soft agar motility assay -0.8 -4.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -3.2 compare
motility inner cut, LB soft agar motility assay -0.8 -4.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -4.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -3.0 compare
motility outer cut, LB soft agar motility assay -0.7 -2.7 compare
motility outer cut, LB soft agar motility assay -0.6 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -3.3 compare
phage 36hr PHYTO10 MOI 1 -0.5 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -3.4 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -3.0 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -3.6 compare
carbon source Malonic (C) +0.5 +3.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +3.0 compare